Endemism and Regional Color and Genetic Differences in Five Putatively Cosmopolitan Reef Fishes

Abstract:  Endemism is thought to be relatively rare in marine systems due to the lack of allopatric barriers and the potential for long-distance colonization via pelagic larval dispersal. Although many species of coral reef fishes exhibit regionally restricted color variants that are suggestive of regional endemism, such variation is typically ascribed to intraspecific variation. We examined the genetic structure in 5 putatively monospecific fishes from the Indo-West Pacific ( Amphiprion melanopus , Chrysiptera talboti , and Pomacentrus moluccensis [Pomacentridae] and Cirrhilabrus punctatus , and Labroides dimidiatus [Labridae]) that express regional color variation unique to this area. Mitochondrial-control-region sequence analysis showed shallow to deep genetic divergence in all 5 species (sequence divergence 2–17%), with clades concordant with regional color variation. These results were partially supported by nuclear RAG2 data. An analysis of molecular variation (AMOVA) mirrored the phylogenetic results; Φ_ST values ranged from 0.91 to 0.7, indicating high levels of geographic partitioning of genetic variation. Concordance of genetics and phenotype demonstrate the genetic uniqueness of southwestern Pacific color variants, indicating that these populations are at a minimum distinct evolutionarily significant units and perhaps distinct regionally endemic species. Our results indicate that the alpha biodiversity of the southwestern Pacific is likely underestimated even in well-studied groups, such as reef fishes, and that regional endemism may be more common in tropical marine systems than previously thought.     

Should We Protect the Strong or the Weak? Risk,Resilience, and the Selection of Marine Protected Areas

Abstract: It is thought that recovery of marine habitats from uncontrollable disturbance may be faster in marine reserves than in unprotected habitats. But which marine habitats should be protected, those areas at greatest risk or those at least risk? We first defined this problem mathematically for 2 alternate conservation objectives. We then analytically solved this problem for both objectives and determined under which conditions each of the different protection strategies was optimal. If the conservation objective was to maximize the chance of having at least 1 healthy site, then the best strategy was protection of the site at lowest risk. On the other hand, if the goal was to maximize the expected number of healthy sites, the optimal strategy was more complex. If protected sites were likely to spend a significant amount of time in a degraded state, then it was best to protect low‐risk sites. Alternatively, if most areas were generally healthy then, counterintuitively, it was best to protect sites at higher risk. We applied these strategies to a situation of cyclone disturbance of coral reefs on Australia's Great Barrier Reef. With regard to the risk of cyclone disturbance, the optimal reef to protect differed dramatically, depending on the expected speed of reef recovery of both protected and unprotected reefs. An adequate consideration of risk is fundamental to all conservation actions and can indicate surprising routes to conservation success.     

Mineralization of particulate organic matter derived from coral-reef organisms in reef sediments of the Gulf of Aqaba

In situ and laboratory incubation experiments in a fringing reef in the Gulf of Aqaba were performed to study degradation rates of particulate organic matter in reef sediments. Coral mucus, clam eggs, and zooxanthellae were used as model particulate organic compounds for these experiments. Aerobic and anaerobic mineralization rates were calculated by dissolved inorganic carbon (DIC) and O₂ fluxes from the sediments under different particulate organic matter additions. Fast enhancement (approximately twofold) of O₂ and DIC fluxes were found with the addition of coral mucus and clam eggs compared with control incubations without addition. Most of the degradation is believed to have occurred anaerobically rather than aerobically (DIC:O₂ ratios were 4.3-28.1). Higher degradation rates of coral mucus and clam eggs were estimated in carbonate sediment than in silicate sediment (1.2-1.6-fold), which was attributed to the different physical and chemical properties of both sediments. Our study shows the significance of the reef sediment as a suitable site for microbial degradation of particulate organic material excreted from different reef community organisms. This may increase the regeneration of nutrients in the reef environment necessary to sustain high biological productivity.     

三亚湾春夏季初级生产力的分布特征及环境影响研究

2006年春季和夏季对三亚湾水域初级生产力进行了调查,结果表明:三亚湾春季和夏季表层潜在初级生产力(以C计)平均值分别为7.54 mS/(m<'3>·h)和6.66 mg/(m<'3>·h);两个季节初级生产力的水平分布特征相似.在三亚河口近岸水域始终存在叶绿素及初级生产力的高值区,这与河口近岸营养物质输入密切相关,并...     

吹填珊瑚礁砂地基处理方法适用性与加固效果应用研究

珊瑚礁砂是珊瑚礁、贝壳等经侵蚀、破碎后沉积在近岸环境中的一种生物碎屑,吹填珊瑚礁砂作为地基土可就地取材、大幅降低工程造价、缩短施工时间。然而,吹填珊瑚礁砂地基处理工程实践中一般采用基于陆源砂的地基处理与加固效果评价方法,具有很大的不确定性。本文在苏丹、沙特、南海某试验区分别采用振动碾压、强夯、振冲法对吹填珊瑚礁砂场地进行地基加固处理,依据载荷试验、标准贯入、动力触探、静力触探等原位测试对珊瑚礁砂场地进行加固效果与有效深度评价,采用平板载荷试验获取珊瑚礁砂场地处理后的地基承载力,结果表明:(1)珊瑚礁砂场地振动碾压法的有效加固深度约1.0 m,加固深度十分有限;(2)500~3000 kN·m夯击能下强夯法的有效加固深度2.0~4.0 m,明显低于相同条件下陆源砂的有效加固深度;(3)珊瑚礁砂场地振冲后可达到中密、密实状态,132 kW振冲的最大有效加固深度为8.0~10.0 m;(4)平板载荷试验获取的珊瑚礁砂承载力特征值与动力触探击数存在良好的经验关系,地基承载力特征值多数超过500 kPa,最高可达2000 kPa,与陆源砂的承载力特性存在显著差别,珊瑚礁砂具有“珊瑚礁砂变形大、高压缩性”的特点易出现于高应力情况下,加固后的珊瑚礁砂地基在常压应力下,往往具备较高的强度与承载能力。     

Chemical Behaviour of Calcium in Stabilized Oil Ash Reef Blocks After Five Years in the Ocean

Reef blocks made from stabilized oil ash were taken from the sea after five years in the ocean to examine the chemical behaviour of calcium. Experiments included (1) determination of the calcium leaching rate and a comparison with the rate for unexposed blocks to test the validity of a diffusion model for predicting long term (5 years) leaching rates, (2) determination of the effect of biological cover (shell) on the leaching rate, (3) determination of the leaching rate of the core of exposed reef blocks, (4) determination of the calcium content in 'ring areas' - regions of discoloration observed in sectioned exposed reef blocks, and (5) determination of the leachable fraction of the total calcium in exposed reef blocks. Results showed the presence of a pronounced calcium discontinuity zone located 3-7 cm from the outside surface of the reef blocks. Cumulated calcium release rates ranged from 2.81-3.14 μmol cm^-2 day^-1 for original unexposed reef blocks and the core of exposed (in the ocean for five years) blocks, respectively, to 0.47-0.50 μmol cm^-2 day^-1 for outside (facing sea water) surfaces of exposed reef blocks. Tank leaching studies also showed that the presence or absence of hard biological cover (shells) had little or no effect on the calcium release rate. the diffusion model normally used in modelling the chemical behaviour of calcium cannot be used to predict the long term (five years) leaching of calcium. the core of the exposed blocks released calcium at a rate similar to new, unexposed reef block material. Overall, it appears that the calcium discontinuity zone is probably responsible for restricting the release of calcium and hence the failure of the diffusion model.     

Marine litter in coral reef areas along the Jordan Gulf of Aqaba, Red Sea

Composition and abundance of submerged marine litter at six selected sites within a coral reef area along the Jordanian coast of the Gulf of Aqaba have been estimated. The litter was collected in clean up voluntary campaigns that took place in the period between 25 August 2003 and 29 February 2004. A total of 10,506 items weighing 1159 kg were collected during the survey. Mean litter density in the individual sampling sites varied between 1 and 6 items/m(2) with an overall mean density of 2.8 items/m(2). The mean weight of the collected items per sampling site varied between 0.06 and 1.06 kg/m(2) with an overall mean of 0.31 kg/m(2). Plastic accounted for 42% of the collected items, fishing gear was the second most abundant (31%) while metal was the third most abundant item (17%). By comparison, cardboard constituted 1%, and rubber and other items accounted for less than 1% of the total items collected during the campaigns. Approximately 61% of the plastics consisted of bags followed by bottles (24%), plastic containers and sheets accounted for 13 and 2%, respectively. Statistical analysis indicates no significant differences between the sites in terms of litter count and weight. Potential sources are pointed out and recommendations and actions to address the problem are suggested.     

Starting point or solution? Community-based marine protected areas in the Philippines

In 1985, in response to declining coral reef conditions, local residents and officials established small, no-take marine sanctuaries on Balicasag and Pamilacan Islands through a community-based process. The implementation of marine protected areas (MPAs) on Balicasag and Pamilacan Islands has been a partial success. As a direct result of protection, living hard coral cover has increased by 119% in Balicasag's sanctuary and by 67% in the non-sanctuary during the period 1984 to 1999, but Balicasag's reef is increasingly affected by breakage from anchors from dive boats and Crown-of-thorns starfish infestations. During the same period, living hard coral cover decreased by 20% in Pamilacan's sanctuary and by 45% in the non-sanctuary from 1984 to 1999. The decrease in living hard coral cover in Pamilacan's sanctuary is most likely a result of the 1998 bleaching event, Crown-of-thorn starfish and possible storm damage. Although there was an initial increase in the economically important target fish abundance in the Balicasag sanctuary and non-sanctuary and in the Pamilacan sanctuary during the first two years of implementation in the mid-1980s, there has since been a significant decline. Mean target fish abundance for the Balicasag non-sanctuary at 230 (+/- 65) individuals per 500 m2 is not significantly different from control sites without MPAs on nearby Panglao and Cabilao Islands at 164 (+/- 67) individuals per 500 m2. In general, fish abundance and diversity inside and outside the sanctuaries peaked in 1986, a year after the establishment of the sanctuaries when enforcement was strictest. Therefore, despite considerable success in enforcing regulations associated with these small MPAs at Balicasag and Pamilacan Islands, a trend of declining fish abundance and species richness among economically valuable species immediately outside the no-take areas highlights the limitations of small and isolated MPAs. This study contributes to the growing sentiment that it is not realistic for scattered, small no-take areas to maintain fish abundance and diversity on surrounding reefs when intensive fishing effort immediately adjacent to no-take areas removes most fish that exit these areas. This finding emphasizes the importance of nesting individual MPAs within broader management regimes that lead to overall fishing effort reduction and networking of MPAs. Among other recommendations, the authors advocate for continued support for community-based MPAs, a network of MPAs, reduced fishing effort in areas surrounding the MPAs and other management measures to improve the quality of the coral reef habitats.     

Development of rapid,cost effective coral survey techniques: tools for management and conservation planning

Coral reefs are highly dynamic and productive marine ecosystems, providing habitat and refuge for an enormous number of species including fish, invertebrates and algae. With increased anthropogenic pressures and global climate change, many coral reefs are rapidly declining. Currently, there is limited knowledge on condition and community assemblage composition of shallow fringing coral reefs along the south-eastern coast of Queensland, Australia. With increased demand to determine existence of coastal fringing reefs by National Regional Management groups, a rapid cost effective method to determine reef composition and condition was required. The aim of this study was to determine the benthic structure and extent of two small coastal fringing reefs (Hummock Hill Reef and Stringers Reef) along the Southern Great Barrier Reef. Reef substrate assessments were carried out using a rapid assessment technique and a Point Intercept Method (PIM). The data were analysed and classified using a Geographic Information System (GIS). Percent substrate cover was calculated using a visual basic image analysis program. The Point intercept method showed higher accuracy over the rapid assessment technique (up to 15–40% difference) and was thus deemed a more suitable classification tool for reefs with high structural complexity and heterogeneity. This study focused on piloting a rapid, cost effective Point Intercept Technique using random point count methodology to document coral benthic habitat and extent over a commonly used rapid assessment method as a tool for reef coastal management and conservation. The two techniques were compared and substrate classification success, limitations and errors were discussed.     

Experimental Assessment of Coral Reef Rehabilitation Following Blast Fishing

Abstract:  Illegal fishing with explosives has damaged coral reefs throughout Southeast Asia. In addition to killing fish and other organisms, the blasts shatter coral skeletons, leaving fields of broken rubble that shift in the current, abrading or burying new coral recruits, and thereby slowing or preventing reef recovery. Successful restoration and rehabilitation efforts can contribute to coral reef conservation. We used field experiments to assess the effectiveness of different low-cost methods for coral reef rehabilitation in Komodo National Park (KNP), Indonesia. Our experiments were conducted at three different spatial scales. At a scale of 1 × 1 m plots, we tested three different rehabilitation methods: rock piles, cement slabs, and netting pinned to the rubble. Significantly more corals per square meter grew on rocks, followed by cement, netting, and untreated rubble, although many plots were scattered by strong water current or buried by rubble after 2.5 years. To test the benefits of the most successful treatment, rocks, at more realistic scales, we established 10 × 10 m plots of rock piles at each of our nine sites in 2000. Three years after installation, coverage by hard corals on the rocks continued to increase, although rehabilitation in high current areas remained the most difficult. In 2002 rehabilitation efforts in KNP were increased over 6000 m² to test four rock pile designs at each of four rubble field sites. Assuming that there is an adequate larval supply, using rocks for simple, low-budget, large-scale rehabilitation appears to be a viable option for restoring the structural foundation of damaged reefs.